Package: BaSTA 2.0.0

BaSTA: Age-Specific Bayesian Survival Trajectory Analysis from Incomplete Census or Capture-Recapture/Recovery Data

Estimates survival and mortality with covariates from census or capture-recapture/recovery data in a Bayesian framework when many individuals are of unknown age. It includes tools for data checking, model diagnostics and outputs such as life-tables and plots, as described in Colchero, Jones, and Rebke (2012) <doi:10.1111/j.2041-210X.2012.00186.x> and Colchero et al. (2021) <doi:10.1038/s41467-021-23894-3>.

Authors:Fernando Colchero [aut, cre], Owen Jones [ctb]

BaSTA_2.0.0.tar.gz
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BaSTA_2.0.0.tgz(r-4.4-any)BaSTA_2.0.0.tgz(r-4.3-any)
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BaSTA.pdf |BaSTA.html
BaSTA/json (API)

# Install 'BaSTA' in R:
install.packages('BaSTA', repos = c('https://fercol.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • bastaCMRdat - Example of capture-mark-recapture data for BaSTA analysis.
  • bastaCMRout - Output from a Bayesian Survival Trajectory Analysis (BaSTA) analysis on a simulated capture-mark-recapture (CMR) dataset.
  • bastaCensDat - Example of census data for BaSTA analysis.
  • bastaCensOut - Output from a Bayesian Survival Trajectory Analysis (BaSTA) analysis on a simulated census dataset.

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

11 exports 2.27 score 2 dependencies 10 mentions 12 scripts 594 downloads

Last updated 2 months agofrom:eba09a99ca. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 09 2024
R-4.5-winOKSep 09 2024
R-4.5-linuxOKSep 09 2024
R-4.4-winOKSep 09 2024
R-4.4-macOKSep 09 2024
R-4.3-winOKSep 09 2024
R-4.3-macOKSep 09 2024

Exports:bastabasta.defaultCensusToCaptHistDataCheckFixCMRdataprint.bastaprint.bastaCheckCensprint.bastaCheckCMRsummary.bastasummary.bastaCheckCenssummary.bastaCheckCMR

Dependencies:snowsnowfall